// Copyright (C) 2004-2006 The Trustees of Indiana University. // Copyright (C) 2002 Brad King and Douglas Gregor // Use, modification and distribution is subject to the Boost Software // License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at // http://www.boost.org/LICENSE_1_0.txt) // Authors: Douglas Gregor // Andrew Lumsdaine // Brian Barrett #ifndef BOOST_PARALLEL_GRAPH_PAGE_RANK_HPP #define BOOST_PARALLEL_GRAPH_PAGE_RANK_HPP #ifndef BOOST_GRAPH_USE_MPI #error "Parallel BGL files should not be included unless has been included" #endif #include #include #include #include #include #include #include #include // #define WANT_MPI_ONESIDED 1 namespace boost { namespace graph { namespace distributed { namespace detail { #ifdef WANT_MPI_ONESIDED template void page_rank_step(const Graph& g, RankMap from_rank, MPI_Win to_win, typename property_traits::value_type damping, owner_map_t owner) { typedef typename property_traits::value_type rank_type; int me, ret; MPI_Comm_rank(MPI_COMM_WORLD, &me); // MPI_Accumulate is not required to store the value of the data // being sent, only the address. The value of the memory location // must not change until the end of the access epoch, meaning the // call to MPI_Fence. We therefore store the updated value back // into the from_rank map before the accumulate rather than using // a temporary. We're going to reset the values in the from_rank // before the end of page_rank_step() anyway, so this isn't a huge // deal. But MPI-2 One-sided is an abomination. BGL_FORALL_VERTICES_T(u, g, Graph) { put(from_rank, u, (damping * get(from_rank, u) / out_degree(u, g))); BGL_FORALL_ADJ_T(u, v, g, Graph) { ret = MPI_Accumulate(&(from_rank[u]), 1, MPI_DOUBLE, get(owner, v), local(v), 1, MPI_DOUBLE, MPI_SUM, to_win); BOOST_ASSERT(MPI_SUCCESS == ret); } } MPI_Win_fence(0, to_win); // Set new rank maps for the other map. Do this now to get around // the stupid synchronization rules of MPI-2 One-sided BGL_FORALL_VERTICES_T(v, g, Graph) put(from_rank, v, rank_type(1 - damping)); } #endif template struct rank_accumulate_reducer { BOOST_STATIC_CONSTANT(bool, non_default_resolver = true); template T operator()(const K&) const { return T(0); } template T operator()(const K&, const T& x, const T& y) const { return x + y; } }; } // end namespace detail template void page_rank_impl(const Graph& g, RankMap rank_map, Done done, typename property_traits::value_type damping, typename graph_traits::vertices_size_type n, RankMap2 rank_map2) { typedef typename property_traits::value_type rank_type; int me; MPI_Comm_rank(MPI_COMM_WORLD, &me); typename property_map::const_type owner = get(vertex_owner, g); (void)owner; typedef typename boost::graph::parallel::process_group_type ::type process_group_type; typedef typename process_group_type::process_id_type process_id_type; process_group_type pg = process_group(g); process_id_type id = process_id(pg); BOOST_ASSERT(me == id); rank_type initial_rank = rank_type(rank_type(1) / n); BGL_FORALL_VERTICES_T(v, g, Graph) put(rank_map, v, initial_rank); #ifdef WANT_MPI_ONESIDED BOOST_ASSERT(sizeof(rank_type) == sizeof(double)); bool to_map_2 = true; MPI_Win win, win2; MPI_Win_create(&(rank_map[*(vertices(g).first)]), sizeof(double) * num_vertices(g), sizeof(double), MPI_INFO_NULL, MPI_COMM_WORLD, &win); MPI_Win_set_name(win, "rank_map_win"); MPI_Win_create(&(rank_map2[*(vertices(g).first)]), sizeof(double) * num_vertices(g), sizeof(double), MPI_INFO_NULL, MPI_COMM_WORLD, &win2); MPI_Win_set_name(win, "rank_map2_win"); // set initial rank maps for the first iteration... BGL_FORALL_VERTICES_T(v, g, Graph) put(rank_map2, v, rank_type(1 - damping)); MPI_Win_fence(0, win); MPI_Win_fence(0, win2); while ((to_map_2 && !done(rank_map, g)) || (!to_map_2 && !done(rank_map2, g))) { if (to_map_2) { graph::distributed::detail::page_rank_step(g, rank_map, win2, damping, owner); to_map_2 = false; } else { graph::distributed::detail::page_rank_step(g, rank_map2, win, damping, owner); to_map_2 = true; } } synchronize(boost::graph::parallel::process_group(g)); MPI_Win_free(&win); MPI_Win_free(&win2); #else // The ranks accumulate after each step. rank_map.set_reduce(detail::rank_accumulate_reducer()); rank_map2.set_reduce(detail::rank_accumulate_reducer()); rank_map.set_consistency_model(boost::parallel::cm_flush | boost::parallel::cm_reset); rank_map2.set_consistency_model(boost::parallel::cm_flush | boost::parallel::cm_reset); bool to_map_2 = true; while ((to_map_2 && !done(rank_map, g)) || (!to_map_2 && !done(rank_map2, g))) { /** * PageRank can implemented slightly more efficiently on a * bidirectional graph than on an incidence graph. However, * distributed PageRank requires that we have the rank of the * source vertex available locally, so we force the incidence * graph implementation, which pushes rank from source to * target. */ typedef incidence_graph_tag category; if (to_map_2) { graph::detail::page_rank_step(g, rank_map, rank_map2, damping, category()); to_map_2 = false; } else { graph::detail::page_rank_step(g, rank_map2, rank_map, damping, category()); to_map_2 = true; } using boost::graph::parallel::process_group; synchronize(process_group(g)); } rank_map.reset(); #endif if (!to_map_2) BGL_FORALL_VERTICES_T(v, g, Graph) put(rank_map, v, get(rank_map2, v)); } template void page_rank(const Graph& g, RankMap rank_map, Done done, typename property_traits::value_type damping, typename graph_traits::vertices_size_type n, RankMap2 rank_map2 BOOST_GRAPH_ENABLE_IF_MODELS_PARM(Graph, distributed_graph_tag)) { (page_rank_impl)(g, rank_map, done, damping, n, rank_map2); } template void remove_dangling_links(MutableGraph& g BOOST_GRAPH_ENABLE_IF_MODELS_PARM(MutableGraph, distributed_graph_tag)) { typename graph_traits::vertices_size_type old_n; do { old_n = num_vertices(g); typename graph_traits::vertex_iterator vi, vi_end; for (boost::tie(vi, vi_end) = vertices(g); vi != vi_end; /* in loop */) { typename graph_traits::vertex_descriptor v = *vi++; if (out_degree(v, g) == 0) { clear_vertex(v, g); remove_vertex(v, g); } } } while (num_vertices(g) < old_n); } } // end namespace distributed using distributed::page_rank; using distributed::remove_dangling_links; } } // end namespace boost::graph #endif // BOOST_PARALLEL_GRAPH_PAGE_RANK_HPP